Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_8_11041471_11042494_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11041471 - 11042494

Intron Length:

1024

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAATATGA

5'SS Class:

strong_major

3'SS Sequence:

ATTTCTCTGTCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTGAT

U12 Branch Point Sequence:

TCTATCTTGATT

Flanking Amino Acid:

LENLSGHSLLSFSDKGRSQK

Intron Amino Acid Position:

905

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.71

70.6

36.1

Major BPS

83.8

0.84

73.6

41.8

Major PPT

78.3

0.64

77.9

35.9

Minor 5ss

37.4

-1.4

48.4

47.1

Minor BPS

0.65

1.2

78.91

37.7

Associated Gene:

Gene:

CEP350

Ensembl Gene ID:

ENSAPLG00000011152

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047406

11007766 - 11053862

46097

ENSAPLT00000011644

11007766 - 11053862

46097