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Intron Name: Anas_platyrhynchos_platyrhynchos_8_11049197_11049645_R


Intron Information:

Intron Rank:
3

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
11049197 - 11049645

Intron Length:
449

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTATAGCTG

5'SS Class:
major

3'SS Sequence:
TGTTCATTTGTAG|C

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TGTTCAT

U12 Branch Point Sequence:
ATTTCTGAAAAT

Flanking Amino Acid:
SQLPTVQESQPKPGYQPSGE

Intron Amino Acid Position:
345

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
70.9
0.49
1.1
59.4
45

Major BPS
84.8
0.86
1
85.7
34.9

Major PPT
79.5
0.66
0.8
74.2
35.4

Minor 5ss
39.8
-1.1
3.4
55.3
48.9

Minor BPS
48.2
-0
2.3
75.14
41.9

Associated Gene:

Gene:
CEP350

Ensembl Gene ID:

Chromosome:
8

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

11007766 - 11053862
46097

11007766 - 11053862
46097