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Intron Name: Anas_platyrhynchos_platyrhynchos_8_11127944_11128070_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

11127944 - 11128070

Intron Length:

127

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGCTG

5'SS Class:

strong_major

3'SS Sequence:

TGCTCCCCAGAAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTGTAAC

U12 Branch Point Sequence:

TTTCTGTGGATG

Flanking Amino Acid:

QLQPCPTEAPEDCEDKVTAN

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

69.5

42.7

Major BPS

74.5

0.61

1.1

75.6

36.6

Major PPT

57.1

0.16

1.1

32.1

Minor 5ss

28.9

-2.4

3.3

37.6

47.1

Minor BPS

44.2

-0.6

2.2

55.89

39.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023321

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044199

11124351 - 11128186

3836