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Intron Name: Anas_platyrhynchos_platyrhynchos_8_11191879_11192278_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

11191879 - 11192278

Intron Length:

400

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

ACA|GCAAAAAAC

5'SS Class:

weak_major

3'SS Sequence:

GCCTTGTCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAATGAC

U12 Branch Point Sequence:

TGGCTACGAAAT

Flanking Amino Acid:

SPEYLKSHQTGCLQTPDRLW

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

52.4

0.06

1.4

58.3

43.3

Major BPS

58.2

0.2

49.5

35.1

Major PPT

75.3

0.57

0.9

68.6

37.3

Minor 5ss

-2.9

3.9

39.9

Minor BPS

39.2

-0.7

1.9

54.66

39.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012313

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012824

11181025 - 11192407

11383