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Intron Name: Anas_platyrhynchos_platyrhynchos_8_11200586_11201039_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11200586 - 11201039

Intron Length:

454

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGTTAC

5'SS Class:

strong_major

3'SS Sequence:

TTCTGTCTTCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTATAAC

U12 Branch Point Sequence:

CAGATTATAACA

Flanking Amino Acid:

YYYAYRDFLWFFGKKFRAAA

Intron Amino Acid Position:

437

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.9

78.4

32.4

Major BPS

77.9

0.69

78.3

31.3

Major PPT

85.1

0.79

0.8

76.9

37.4

Minor 5ss

40.1

-1.1

2.8

44.3

43.6

Minor BPS

47.5

-0.1

1.6

53.39

Associated Gene:

Gene:

SOAT1

Ensembl Gene ID:

ENSAPLG00000012658

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013231

11198263 - 11221534

23272