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Intron Name: Anas_platyrhynchos_platyrhynchos_8_11202213_11203334_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

11202213 - 11203334

Intron Length:

1122

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTTCGCACA

5'SS Class:

weak_major

3'SS Sequence:

TCTTCTGTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTAAT

U12 Branch Point Sequence:

TTTCTCTTAAAA

Flanking Amino Acid:

PMVRWGYVATKCLVRFFYAY

Intron Amino Acid Position:

327

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

58.1

0.19

1.2

57.6

41.4

Major BPS

0.92

0.9

86.2

29.1

Major PPT

86.1

0.81

0.8

84.1

30.8

Minor 5ss

36.7

-1.5

2.9

42.6

38.1

Minor BPS

74.6

0.77

1.3

82.08

Associated Gene:

Gene:

SOAT1

Ensembl Gene ID:

ENSAPLG00000012658

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013231

11198263 - 11221534

23272