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Intron Name: Anas_platyrhynchos_platyrhynchos_8_11204112_11204767_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11204112 - 11204767

Intron Length:

656

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTA|GTGAGTAAC

5'SS Class:

major

3'SS Sequence:

TCTCCTCTTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GACTGAA

U12 Branch Point Sequence:

CAAGACTGAAGA

Flanking Amino Acid:

RVLSSVKEKSSSVPIPRISQ

Intron Amino Acid Position:

288

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.59

31.2

Major BPS

56.6

0.16

1.2

49.3

Major PPT

80.8

0.69

0.7

73.3

31.6

Minor 5ss

32.4

-2

2.7

38.3

34.3

Minor BPS

42.5

-0.5

1.9

47.25

42.1

Associated Gene:

Gene:

SOAT1

Ensembl Gene ID:

ENSAPLG00000012658

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013231

11198263 - 11221534

23272