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Intron Name: Anas_platyrhynchos_platyrhynchos_8_11204847_11205914_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11204847 - 11205914

Intron Length:

1068

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGTGCC

5'SS Class:

strong_major

3'SS Sequence:

CTTAATATTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTAAT

U12 Branch Point Sequence:

GTTCTCTTAATA

Flanking Amino Acid:

ASRFIVILEQVRLVMKAHSF

Intron Amino Acid Position:

262

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.2

0.83

77.2

32.8

Major BPS

0.92

0.9

86.2

29.1

Major PPT

76.8

0.6

0.9

69.4

40.1

Minor 5ss

32.6

-2

3.4

44.1

43.8

Minor BPS

74.1

0.75

1.1

77.33

Associated Gene:

Gene:

SOAT1

Ensembl Gene ID:

ENSAPLG00000012658

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013231

11198263 - 11221534

23272