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Intron Name: Anas_platyrhynchos_platyrhynchos_8_11270066_11270846_F


Intron Information:

Intron Rank:
2

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
11270066 - 11270846

Intron Length:
781

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTAAGGCTC

5'SS Class:
strong_major

3'SS Sequence:
CTTCTGCTCATAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
ATTGTAT

U12 Branch Point Sequence:
TCGTGCTTACTC

Flanking Amino Acid:
SGDNTLSITKGEKLRVLGYN

Intron Amino Acid Position:
80

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
89.5
0.93
0.9
76.9
38.6

Major BPS
62.7
0.32
1.4
63.4
44

Major PPT
73.9
0.54
0.8
68.4
32

Minor 5ss
35.3
-1.7
3.4
50.1
46.5

Minor BPS
49.6
-0
2.1
61.22
45

Associated Gene:

Gene:
ABL2

Ensembl Gene ID:

Chromosome:
8

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

11266190 - 11280722
14533

11260322 - 11280722
20401