Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_8_11272051_11272818_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11272051 - 11272818

Intron Length:

768

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTTTT

5'SS Class:

strong_major

3'SS Sequence:

TCTATTCGTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GATTAAT

U12 Branch Point Sequence:

TGGTCATGAAGA

Flanking Amino Acid:

NLTVAVKTLKEDTMEVEEFL

Intron Amino Acid Position:

270

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.9

1.06

0.6

14.8

Major BPS

0.6

1.2

75.9

36.3

Major PPT

72.9

0.52

0.9

65.9

40.8

Minor 5ss

40.7

-1

57.8

46.8

Minor BPS

48.4

-0.1

62.46

43.2

Associated Gene:

Gene:

ABL2

Ensembl Gene ID:

ENSAPLG00000013308

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031861

11266190 - 11280722

14533

ENSAPLT00000013872

11260322 - 11280722

20401