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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_8_11274814_11275404_F

Intron Information:

Intron Rank:
6
Intron Class:
major
Intron Phase:
2
Intron Coordinates:
11274814 - 11275404
Intron Length:
591

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
CAG|GTGGGTGAA
5'SS Class:
strong_major
3'SS Sequence:
TTTCTTTATACAG|G
3'SS Class:
strong_PPT
U2 Branch Point Sequence:
TCTTTAT
U12 Branch Point Sequence:
TTTTCTTTATAC
Flanking Amino Acid:
EYLEKKNFIHRDLAARNCLV
Intron Amino Acid Position:
357

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
82.1
0.76
0.9
73.7
32.5
Major BPS
83.9
0.84
1
73.9
41.3
Major PPT
88.1
0.86
0.8
84.3
29.6
Minor 5ss
25.2
-2.9
3.2
30.3
43.5
Minor BPS
67.8
0.54
1.7
79.48
35.7

Associated Gene:

Gene:
ABL2
Ensembl Gene ID:
ENSAPLG00000013308
Chromosome:
8

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000031861
11266190 - 11280722
14533
ENSAPLT00000013872
11260322 - 11280722
20401