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Intron Name: Anas_platyrhynchos_platyrhynchos_8_11276021_11276537_F


Intron Information:

Intron Rank:
8

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
11276021 - 11276537

Intron Length:
517

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAT|GTGAGTATC

5'SS Class:
strong_major

3'SS Sequence:
TCTCCCACTGCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CCTTAAT

U12 Branch Point Sequence:
TGAGCCTTAATC

Flanking Amino Acid:
PPKVYELMRACWKWNPPDRP

Intron Amino Acid Position:
470

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
82.2
0.76
0.9
83.4
28

Major BPS
74.6
0.61
1.1
75.5
35.1

Major PPT
77
0.61
0.8
70.4
28.9

Minor 5ss
37.3
-1.4
2.9
50.4
39.3

Minor BPS
70.5
0.62
1.4
72.02
39.2

Associated Gene:

Gene:
ABL2

Ensembl Gene ID:

Chromosome:
8

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

11266190 - 11280722
14533

11260322 - 11280722
20401