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Intron Name: Anas_platyrhynchos_platyrhynchos_8_11291577_11292369_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

11291577 - 11292369

Intron Length:

793

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

ACT|GCAGGATAG

5'SS Class:

weak_major

3'SS Sequence:

GTTTAATGCTGAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GTTTAAT

U12 Branch Point Sequence:

TGCAGTTTAATG

Flanking Amino Acid:

SFGKCCKTGDSLTVFPAGLE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

52.7

0.06

1.5

43.8

40.6

Major BPS

81.8

0.79

1.1

34.5

Major PPT

48.8

-0

1.7

58.5

46.1

Minor 5ss

28.5

-2.5

4.3

47.1

48.3

Minor BPS

48.5

-0.2

1.9

52.11

43.2

Associated Gene:

Gene:

TOR3A

Ensembl Gene ID:

ENSAPLG00000013573

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014144

11287767 - 11292457

4691