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Intron Name: Anas_platyrhynchos_platyrhynchos_8_1133651_1155718_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1133651 - 1155718

Intron Length:

22068

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTGAGTGTC

5'SS Class:

strong_major

3'SS Sequence:

TTTTGTTTTTAAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAA

U12 Branch Point Sequence:

GTATTTGTATTT

Flanking Amino Acid:

MSWGTELWDQFDNLDKHT

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.78

0.9

75.7

34.4

Major BPS

87.3

0.93

0.8

36.5

Major PPT

82.1

0.72

86.9

31.1

Minor 5ss

31.4

-2.1

3.2

35.2

41.4

Minor BPS

45.4

-0.2

2.1

64.37

40.9

Associated Gene:

Gene:

FNBP1L

Ensembl Gene ID:

ENSAPLG00000003118

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003237

1133627 - 1181234

47608