Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_8_11384868_11385777_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11384868 - 11385777

Intron Length:

910

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGCTAG

5'SS Class:

strong_major

3'SS Sequence:

ATCTGTTCTCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGATAAT

U12 Branch Point Sequence:

TGATAATGAATG

Flanking Amino Acid:

ISDLQQSCEYDIPLLPHVQK

Intron Amino Acid Position:

250

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.73

67.6

40.2

Major BPS

72.6

0.56

1.2

72.3

40.4

Major PPT

78.7

0.65

0.9

69.7

Minor 5ss

43.3

-0.7

2.9

52.3

45.8

Minor BPS

-0.4

1.9

52.83

41.2

Associated Gene:

Gene:

RALGPS2

Ensembl Gene ID:

ENSAPLG00000014184

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014861

11356936 - 11446584

89649