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Intron Name: Anas_platyrhynchos_platyrhynchos_8_11535084_11535882_R


Intron Information:

Intron Rank:
7

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
11535084 - 11535882

Intron Length:
799

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTAACAGGA

5'SS Class:
major

3'SS Sequence:
TTCTTTTGCACAG|G

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TTATGAA

U12 Branch Point Sequence:
TTATGAATAAAA

Flanking Amino Acid:
NLRRTVQPNKDNCRRAENVL

Intron Amino Acid Position:
296

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
76.2
0.62
1.2
66.1
40.1

Major BPS
75.5
0.63
1
66
40.9

Major PPT
82.2
0.72
0.8
79.1
32.9

Minor 5ss
35.3
-1.7
3.4
47.8
47.6

Minor BPS
45.1
-0.3
2.3
64.19
41.2

Associated Gene:

Gene:
RASAL2

Ensembl Gene ID:

Chromosome:
8

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

11510989 - 11681862
170874