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Intron Name: Anas_platyrhynchos_platyrhynchos_8_11688329_11688495_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11688329 - 11688495

Intron Length:

167

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGGCCA

5'SS Class:

major

3'SS Sequence:

CCTTTTCCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTAAT

U12 Branch Point Sequence:

CAGGGTTTAATG

Flanking Amino Acid:

LPAPPLQPHQVRVGVQYCGL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.2

0.66

1.1

63.2

42.9

Major BPS

81.8

0.79

1.1

34.5

Major PPT

85.8

0.81

0.7

80.7

24.6

Minor 5ss

29.6

-2.3

3.4

39.1

46.2

Minor BPS

45.2

-0.5

1.9

43.12

43.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000015161

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015810

11688242 - 11692944

4703