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Intron Name: Anas_platyrhynchos_platyrhynchos_8_11688593_11689551_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11688593 - 11689551

Intron Length:

959

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGTAGG

5'SS Class:

strong_major

3'SS Sequence:

TGTCCTCCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTGTCAA

U12 Branch Point Sequence:

GTTGTGTCAACA

Flanking Amino Acid:

QDRHTPPFTPGMEFSGTVME

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.7

0.77

0.9

70.5

41.3

Major BPS

57.9

0.2

1.4

63.4

44.3

Major PPT

0.68

0.8

73.8

31.3

Minor 5ss

29.8

-2.3

2.6

30.3

36.7

Minor BPS

46.9

-0.2

2.3

63.67

42.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000015161

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015810

11688242 - 11692944

4703