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Intron Name: Anas_platyrhynchos_platyrhynchos_8_11702321_11702657_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

11702321 - 11702657

Intron Length:

337

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAACCCCA

5'SS Class:

major

3'SS Sequence:

TGCCGCTGGCCAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TCGTCAT

U12 Branch Point Sequence:

TCCTCGTCATGC

Flanking Amino Acid:

GGEAIGQPREPSLLLQYRES

Intron Amino Acid Position:

180

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.57

1.2

62.5

43.9

Major BPS

72.2

0.55

1.2

73.6

41.8

Major PPT

56.9

0.16

1.1

49.5

43.9

Minor 5ss

43.7

-0.7

2.9

57.8

46.4

Minor BPS

-0.8

2.5

49.6

Associated Gene:

Gene:

SEC16B

Ensembl Gene ID:

ENSAPLG00000015184

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015857

11700934 - 11714153

13220