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Intron Name: Anas_platyrhynchos_platyrhynchos_8_11705500_11705810_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11705500 - 11705810

Intron Length:

311

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTGAGTCGT

5'SS Class:

strong_major

3'SS Sequence:

GTCTTGGCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTTAC

U12 Branch Point Sequence:

GACCCCTTACTC

Flanking Amino Acid:

TKLLYYGRKKDALLWAMRNQ

Intron Amino Acid Position:

406

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.71

0.9

71.6

40.2

Major BPS

56.6

0.16

1.1

48.9

36.2

Major PPT

72.3

0.5

65.2

41.2

Minor 5ss

32.2

-2

41.5

Minor BPS

52.6

0.06

1.6

57.7

41.1

Associated Gene:

Gene:

SEC16B

Ensembl Gene ID:

ENSAPLG00000015184

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015857

11700934 - 11714153

13220