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Intron Name: Anas_platyrhynchos_platyrhynchos_8_11710288_11711899_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11710288 - 11711899

Intron Length:

1612

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACGGAAG

5'SS Class:

strong_major

3'SS Sequence:

ATGTGTTTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTGCAA

U12 Branch Point Sequence:

CTGGTCTGAGCT

Flanking Amino Acid:

ELSWAAASTAGGEPDYELPL

Intron Amino Acid Position:

688

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.4

0.72

69.7

42.4

Major BPS

0.18

1.3

69.4

37.7

Major PPT

79.6

0.67

0.9

73.4

41.3

Minor 5ss

30.5

-2.2

3.3

38.8

46.5

Minor BPS

47.6

-0.1

1.8

63.86

46.6

Associated Gene:

Gene:

SEC16B

Ensembl Gene ID:

ENSAPLG00000015184

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015857

11700934 - 11714153

13220