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Intron Name: Anas_platyrhynchos_platyrhynchos_8_11713658_11714087_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

11713658 - 11714087

Intron Length:

430

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAT|GTTTTTGAG

5'SS Class:

weak_major

3'SS Sequence:

TGTGCTTCCCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CATGAAT

U12 Branch Point Sequence:

AAACCATGAATG

Flanking Amino Acid:

ECCSFCFFKYLTATRPSQPR

Intron Amino Acid Position:

895

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

52.1

0.05

1.3

51.9

38.8

Major BPS

54.5

0.11

1.4

65.3

38.6

Major PPT

74.4

0.55

0.9

65.7

40.9

Minor 5ss

-1.5

45.8

42.8

Minor BPS

46.3

-0.4

1.7

48.36

38.1

Associated Gene:

Gene:

SEC16B

Ensembl Gene ID:

ENSAPLG00000015184

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015857

11700934 - 11714153

13220