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Intron Name: Anas_platyrhynchos_platyrhynchos_8_1178676_1179312_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1178676 - 1179312

Intron Length:

637

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTGAGTGCA

5'SS Class:

strong_major

3'SS Sequence:

TGTATACTGTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTAAT

U12 Branch Point Sequence:

AATTGTATAATT

Flanking Amino Acid:

NRELQKETDQKDALIKMKDV

Intron Amino Acid Position:

349

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

0.9

73.9

29.7

Major BPS

84.4

0.85

1.1

34.5

Major PPT

64.7

0.33

1.1

63.4

Minor 5ss

29.2

-2.4

3.1

32.8

35.7

Minor BPS

50.5

0.09

72.28

38.9

Associated Gene:

Gene:

FNBP1L

Ensembl Gene ID:

ENSAPLG00000003118

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020087

1165299 - 1184533

19235

ENSAPLT00000003237

1133627 - 1181234

47608

ENSAPLT00000022217

1165299 - 1182672

17374