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Intron Name: Anas_platyrhynchos_platyrhynchos_8_1179446_1179935_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1179446 - 1179935

Intron Length:

490

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGAATC

5'SS Class:

strong_major

3'SS Sequence:

TTTTCCCCCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTGAA

U12 Branch Point Sequence:

AAACCAGTATTT

Flanking Amino Acid:

RLRMEIHKNEAWLSEVEGKV

Intron Amino Acid Position:

394

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.3

0.93

0.8

84.1

26.4

Major BPS

74.6

0.61

65.6

41.4

Major PPT

82.1

0.72

0.7

74.2

30.9

Minor 5ss

32.6

-2

42.8

44.4

Minor BPS

39.9

-0.6

2.2

55.43

40.2

Associated Gene:

Gene:

FNBP1L

Ensembl Gene ID:

ENSAPLG00000003118

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003237

1133627 - 1181234

47608

ENSAPLT00000022217

1165299 - 1182672

17374

ENSAPLT00000020087

1165299 - 1184533

19235