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Intron Name: Anas_platyrhynchos_platyrhynchos_8_11849146_11851645_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11849146 - 11851645

Intron Length:

2500

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCGTG

5'SS Class:

strong_major

3'SS Sequence:

TTGTTTTTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCTTCAT

U12 Branch Point Sequence:

TTGTTTTTGTTT

Flanking Amino Acid:

REEPGLPSVPEISGNTDDIP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.9

0.82

0.9

72.2

39.5

Major BPS

0.62

1.1

77.2

Major PPT

0.94

0.7

88.3

28.9

Minor 5ss

34.5

-1.8

3.4

45.9

49.3

Minor BPS

-0.3

3.4

73.17

Associated Gene:

Gene:

ASTN1

Ensembl Gene ID:

ENSAPLG00000015372

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030000

11849067 - 11875419

26353

ENSAPLT00000016079

11849067 - 11875419

26353