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Intron Name: Anas_platyrhynchos_platyrhynchos_8_11856133_11856542_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

11856133 - 11856542

Intron Length:

410

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGCGCC

5'SS Class:

major

3'SS Sequence:

CCCCGGGCGGCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGCTGAT

U12 Branch Point Sequence:

AGCTGCTGATTG

Flanking Amino Acid:

LHVPEHLIADGSRFILLEGS

Intron Amino Acid Position:

356

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.1

0.62

Major BPS

76.2

0.65

1.1

65.3

43.7

Major PPT

51.5

0.03

1.1

44.8

36.5

Minor 5ss

32.3

-2

3.3

39.1

40.7

Minor BPS

41.6

-0.7

43.06

42.6

Associated Gene:

Gene:

ASTN1

Ensembl Gene ID:

ENSAPLG00000015372

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030000

11849067 - 11875419

26353