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Intron Name: Anas_platyrhynchos_platyrhynchos_8_11864635_11866222_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11864635 - 11866222

Intron Length:

1588

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTGAGTGAG

5'SS Class:

strong_major

3'SS Sequence:

CTGTCTCTGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTGAG

U12 Branch Point Sequence:

CGGTGCTGAGCA

Flanking Amino Acid:

DPTPDPEFLTGMVNFSEVSG

Intron Amino Acid Position:

669

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.3

0.74

0.9

68.7

38.1

Major BPS

52.2

0.06

1.6

51.1

46.3

Major PPT

72.6

0.51

69.1

Minor 5ss

27.1

-2.6

31.9

42.5

Minor BPS

44.3

-0.4

2.1

52.8

45.1

Associated Gene:

Gene:

ASTN1

Ensembl Gene ID:

ENSAPLG00000015372

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030000

11849067 - 11875419

26353

ENSAPLT00000016079

11849067 - 11875419

26353