Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_8_11870846_11871666_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11870846 - 11871666

Intron Length:

821

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGTGG

5'SS Class:

strong_major

3'SS Sequence:

TCCTCCTGCCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CACTGAC

U12 Branch Point Sequence:

ACCCCACTGACT

Flanking Amino Acid:

CPVVDDVKAQEIADKIYNLF

Intron Amino Acid Position:

1031

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.5

0.79

0.9

66.5

41.6

Major BPS

61.3

0.28

52.7

34.2

Major PPT

71.7

0.49

0.9

64.4

36.5

Minor 5ss

30.7

-2.2

3.2

37.8

47.1

Minor BPS

45.6

-0.2

1.9

61.15

42.2

Associated Gene:

Gene:

ASTN1

Ensembl Gene ID:

ENSAPLG00000015372

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030000

11849067 - 11875419

26353

ENSAPLT00000016079

11849067 - 11875419

26353