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Intron Name: Anas_platyrhynchos_platyrhynchos_8_11902434_11908099_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11902434 - 11908099

Intron Length:

5666

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTCTG

5'SS Class:

strong_major

3'SS Sequence:

TCTGTCTCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTCCAC

U12 Branch Point Sequence:

AGCTTTCCACCT

Flanking Amino Acid:

VAENAAGKPKKKFLKIQCLE

Intron Amino Acid Position:

166

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.6

0.81

0.9

75.5

40.6

Major BPS

67.4

0.43

1.3

78.4

35.2

Major PPT

77.6

0.62

0.8

69.4

36.9

Minor 5ss

39.5

-1.2

50.7

39.9

Minor BPS

40.8

-0.6

1.9

55.23

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000015807

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016472

11885681 - 11951872

66192