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Intron Name: Anas_platyrhynchos_platyrhynchos_8_11926359_11927976_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

11926359 - 11927976

Intron Length:

1618

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACTCTCG

5'SS Class:

major

3'SS Sequence:

TCCTTCTGCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

TGGTTCTCATCC

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.1

0.43

1.1

56.3

43.6

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

70.8

0.47

0.9

64.9

36.4

Minor 5ss

43.2

-0.7

57.3

46.9

Minor BPS

50.6

-0

1.8

62.94

42.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000015807

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016472

11885681 - 11951872

66192

Gene:

Ensembl Gene ID:

ENSAPLG00000020139

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028491

11919755 - 11952099

32345