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Intron Name: Anas_platyrhynchos_platyrhynchos_8_1194678_1195837_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1194678 - 1195837

Intron Length:

1160

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGTGAT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCTTTAAAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAATCAT

U12 Branch Point Sequence:

TTTTCTTTAAAG

Flanking Amino Acid:

AWYHGRIPRQVAEGLVQRDG

Intron Amino Acid Position:

182

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.2

0.92

0.8

83.1

28.6

Major BPS

71.6

0.54

33.1

Major PPT

84.5

0.78

0.9

86.4

25.2

Minor 5ss

40.4

-1.1

3.2

57.3

47.4

Minor BPS

78.4

0.75

1.3

80.63

34.8

Associated Gene:

Gene:

BCAR3

Ensembl Gene ID:

ENSAPLG00000003983

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022843

1185705 - 1206777

21073

ENSAPLT00000019439

1185705 - 1272359

86655

ENSAPLT00000004088

1185705 - 1263931

78227