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Intron Name: Anas_platyrhynchos_platyrhynchos_8_1195967_1206693_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1195967 - 1206693

Intron Length:

10727

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGTGCC

5'SS Class:

strong_major

3'SS Sequence:

TCTTTTATTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TAATCTTTTATT

Flanking Amino Acid:

YHRKSIIRVKFSKERQVMDN

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.2

0.83

77.2

32.8

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

89.5

0.89

0.7

85.1

27.9

Minor 5ss

32.6

-2

3.4

44.1

43.8

Minor BPS

64.2

0.53

1.6

77.68

39.1

Associated Gene:

Gene:

BCAR3

Ensembl Gene ID:

ENSAPLG00000003983

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022843

1185705 - 1206777

21073