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Intron Name: Anas_platyrhynchos_platyrhynchos_8_1195967_1222011_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1195967 - 1222011

Intron Length:

26045

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGTAC

5'SS Class:

strong_major

3'SS Sequence:

TCTTTTATTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TAATCTTTTATT

Flanking Amino Acid:

VLDPALEYVKFSKERQVMDN

Intron Amino Acid Position:

139

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.3

0.95

0.8

79.1

30.7

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

89.5

0.89

0.7

85.1

27.9

Minor 5ss

-1.5

3.3

49.2

47.3

Minor BPS

64.2

0.53

1.6

77.68

39.1

Associated Gene:

Gene:

BCAR3

Ensembl Gene ID:

ENSAPLG00000003983

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019439

1185705 - 1272359

86655

ENSAPLT00000004088

1185705 - 1263931

78227