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Intron Name: Anas_platyrhynchos_platyrhynchos_8_11990889_11992387_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11990889 - 11992387

Intron Length:

1499

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCA|GTAAGAAAT

5'SS Class:

major

3'SS Sequence:

TACTGTGTTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTTAC

U12 Branch Point Sequence:

TCTTATTTACTG

Flanking Amino Acid:

LVQKKKQLEAESHAAQLQIL

Intron Amino Acid Position:

127

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.4

0.58

74.8

35.1

Major BPS

78.8

0.71

0.9

69.7

37.1

Major PPT

75.2

0.57

68.1

42.1

Minor 5ss

37.3

-1.4

3.1

55.2

42.8

Minor BPS

50.8

-0.1

1.8

59.41

43.3

Associated Gene:

Gene:

COP1

Ensembl Gene ID:

ENSAPLG00000015973

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047677

11984855 - 12100436

115582

ENSAPLT00000016680

11984855 - 12102304

117450