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Intron Name: Anas_platyrhynchos_platyrhynchos_8_12041616_12043295_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12041616 - 12043295

Intron Length:

1680

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATGTAC

5'SS Class:

strong_major

3'SS Sequence:

TTTCTCTAAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTACAA

U12 Branch Point Sequence:

TTTTCTCTAAAC

Flanking Amino Acid:

FTGQRSKVYQEHEKRCWSVD

Intron Amino Acid Position:

383

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.71

71.9

Major BPS

64.7

0.37

31.5

Major PPT

77.2

0.61

0.9

74.2

34.3

Minor 5ss

37.1

-1.5

3.3

49.8

46.8

Minor BPS

66.5

0.5

1.7

80.51

33.6

Associated Gene:

Gene:

COP1

Ensembl Gene ID:

ENSAPLG00000015973

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047677

11984855 - 12100436

115582

ENSAPLT00000016680

11984855 - 12102304

117450