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Intron Name: Anas_platyrhynchos_platyrhynchos_8_12043378_12049905_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12043378 - 12049905

Intron Length:

6528

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATTTTTT

5'SS Class:

strong_major

3'SS Sequence:

TTTGTTTCTCTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTCAT

U12 Branch Point Sequence:

TTTTGTTTATTC

Flanking Amino Acid:

LLASGSDDAKVKLWSTNLDN

Intron Amino Acid Position:

410

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.8

0.73

82.4

30.8

Major BPS

92.2

1.05

0.7

91.9

19.6

Major PPT

84.5

0.78

0.7

77.9

36.6

Minor 5ss

58.1

0.27

2.3

39.6

Minor BPS

57.3

0.21

73.5

38.4

Associated Gene:

Gene:

COP1

Ensembl Gene ID:

ENSAPLG00000015973

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047677

11984855 - 12100436

115582

ENSAPLT00000016680

11984855 - 12102304

117450