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Intron Name: Anas_platyrhynchos_platyrhynchos_8_12142407_12142827_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12142407 - 12142827

Intron Length:

421

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGGTG

5'SS Class:

strong_major

3'SS Sequence:

CCCTTCTCATCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTGAT

U12 Branch Point Sequence:

TTCCCTCTACCC

Flanking Amino Acid:

DGYGGQDCSAVAPPENLRVT

Intron Amino Acid Position:

325

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.7

0.94

0.9

76.9

38.6

Major BPS

78.8

0.71

67.6

40.6

Major PPT

74.5

0.55

0.8

73.6

29.9

Minor 5ss

32.8

-2

3.7

45.9

49.3

Minor BPS

48.6

-0.1

1.9

64.28

41.5

Associated Gene:

Gene:

TNR

Ensembl Gene ID:

ENSAPLG00000001323

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000001829

12138858 - 12166113

27256