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Intron Name: Anas_platyrhynchos_platyrhynchos_8_12149952_12151493_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12149952 - 12151493

Intron Length:

1542

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGCCGGA

5'SS Class:

major

3'SS Sequence:

TTGTGTCACGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTGTCAC

U12 Branch Point Sequence:

CCTTGTGTCACG

Flanking Amino Acid:

SRPALAQFTTEIDAPKNLRV

Intron Amino Acid Position:

592

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

64.5

0.34

1.3

54.2

45.2

Major BPS

57.2

0.18

1.4

63.1

44.5

Major PPT

71.3

0.48

66.3

39.8

Minor 5ss

39.9

-1.1

3.5

55.7

48.5

Minor BPS

38.7

-1

2.6

45.57

47.6

Associated Gene:

Gene:

TNR

Ensembl Gene ID:

ENSAPLG00000001323

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000001829

12138858 - 12166113

27256