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Intron Name: Anas_platyrhynchos_platyrhynchos_8_12154259_12154917_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12154259 - 12154917

Intron Length:

659

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAGAAA

5'SS Class:

strong_major

3'SS Sequence:

CTCCGGTTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CAGTCAG

U12 Branch Point Sequence:

GTGGGCTGACCC

Flanking Amino Acid:

SLEATVDAFTGVRPITQLHF

Intron Amino Acid Position:

772

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.1

0.76

0.9

77.3

32.6

Major BPS

46.3

-0.2

1.6

52.7

43.2

Major PPT

74.9

0.56

0.9

67.8

37.6

Minor 5ss

30.9

-2.2

3.2

46.4

Minor BPS

42.2

-0.6

2.1

51.46

45.5

Associated Gene:

Gene:

TNR

Ensembl Gene ID:

ENSAPLG00000001323

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000001829

12138858 - 12166113

27256