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Intron Name: Anas_platyrhynchos_platyrhynchos_8_12158167_12159152_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12158167 - 12159152

Intron Length:

986

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTCCT

5'SS Class:

strong_major

3'SS Sequence:

GACCCATGTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GACCCAT

U12 Branch Point Sequence:

TGGTGTCTACCT

Flanking Amino Acid:

TYRSTDGSRKELIVDAEDTW

Intron Amino Acid Position:

1079

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.97

0.8

80.5

33.9

Major BPS

48.7

-0

1.4

58.4

40.3

Major PPT

61.4

0.26

53.3

40.3

Minor 5ss

31.4

-2.1

2.9

42.1

44.5

Minor BPS

44.1

-0.3

2.2

64.77

45.8

Associated Gene:

Gene:

TNR

Ensembl Gene ID:

ENSAPLG00000001323

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000001829

12138858 - 12166113

27256