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Intron Name: Anas_platyrhynchos_platyrhynchos_8_12159286_12161785_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12159286 - 12161785

Intron Length:

2500

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGCTC

5'SS Class:

strong_major

3'SS Sequence:

TTTAATTTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTTTTTTAATT

Flanking Amino Acid:

SGFISTTFTTGGRIFANPQD

Intron Amino Acid Position:

1123

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.2

0.83

0.9

38.2

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

86.2

0.81

0.8

80.2

36.9

Minor 5ss

29.9

-2.3

3.4

45.6

Minor BPS

84.9

1.17

0.8

94.97

24.6

Associated Gene:

Gene:

TNR

Ensembl Gene ID:

ENSAPLG00000001323

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000001829

12138858 - 12166113

27256