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Intron Name: Anas_platyrhynchos_platyrhynchos_8_12163262_12163991_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12163262 - 12163991

Intron Length:

730

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGACCT

5'SS Class:

strong_major

3'SS Sequence:

CTTGTCTCTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATCTCAC

U12 Branch Point Sequence:

GGTGCCACATCT

Flanking Amino Acid:

FGNLEDEFWLGLDNIHKITS

Intron Amino Acid Position:

1206

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.7

0.72

41.8

Major BPS

76.2

0.65

0.9

77.4

26.5

Major PPT

82.1

0.72

0.8

73.5

37.1

Minor 5ss

34.2

-1.8

3.2

41.7

44.2

Minor BPS

43.8

-0.3

2.1

63.15

46.1

Associated Gene:

Gene:

TNR

Ensembl Gene ID:

ENSAPLG00000001323

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000001829

12138858 - 12166113

27256