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Intron Name: Anas_platyrhynchos_platyrhynchos_8_12165563_12165993_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12165563 - 12165993

Intron Length:

431

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGGCC

5'SS Class:

strong_major

3'SS Sequence:

TTCCTCCTGCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTTAC

U12 Branch Point Sequence:

TTACCCTGAACC

Flanking Amino Acid:

GKYGEARHSQGINWYHWKGH

Intron Amino Acid Position:

1315

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.8

0.91

0.9

77.9

31.9

Major BPS

0.6

65.6

41.1

Major PPT

75.3

0.57

0.9

69.3

36.9

Minor 5ss

30.5

-2.2

3.5

41.8

45.1

Minor BPS

71.6

0.66

1.4

78.45

36.1

Associated Gene:

Gene:

TNR

Ensembl Gene ID:

ENSAPLG00000001323

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000001829

12138858 - 12166113

27256