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Intron Name: Anas_platyrhynchos_platyrhynchos_8_12178787_12178938_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

12178787 - 12178938

Intron Length:

152

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTGCAGGAG

5'SS Class:

weak_major

3'SS Sequence:

CATGGAGCAGAAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GCAACAT

U12 Branch Point Sequence:

AGCCTGCTACCC

Flanking Amino Acid:

MPRISSFFNSILE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

55.5

0.13

1.1

44.4

39.3

Major BPS

46.3

-0.2

1.3

51.3

42.7

Major PPT

46.5

-0.2

1.1

39.2

Minor 5ss

-3.3

3.4

18.7

38.3

Minor BPS

36.2

-1

2.2

42.94

Associated Gene:

Gene:

KIAA0040

Ensembl Gene ID:

ENSAPLG00000030307

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038695

12178778 - 12179268

491