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Intron Name: Anas_platyrhynchos_platyrhynchos_8_12219827_12221042_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12219827 - 12221042

Intron Length:

1216

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCAGTGCA

5'SS Class:

strong_major

3'SS Sequence:

GTTCTCCATACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAA

U12 Branch Point Sequence:

GTATTCTAAACT

Flanking Amino Acid:

PISVEGSSRKIKTDTVLVMC

Intron Amino Acid Position:

138

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

1.2

35.3

Major BPS

85.3

0.88

0.8

84.2

21.8

Major PPT

76.2

0.59

0.9

69.7

35.8

Minor 5ss

28.4

-2.5

2.9

33.4

41.6

Minor BPS

67.2

0.62

1.7

81.23

40.2

Associated Gene:

Gene:

CACYBP

Ensembl Gene ID:

ENSAPLG00000003474

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048157

12217935 - 12222945

5011

ENSAPLT00000003554

12217935 - 12223016

5082