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Intron Name: Anas_platyrhynchos_platyrhynchos_8_1222052_1233299_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1222052 - 1233299

Intron Length:

11248

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACTTGTA

5'SS Class:

major

3'SS Sequence:

TGTTTTCTTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCTT

U12 Branch Point Sequence:

GTTTTCTTACAG

Flanking Amino Acid:

PNGKSNKLHARDQNVLDPAL

Intron Amino Acid Position:

125

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.5

0.65

74.5

35.9

Major BPS

39.5

-0.6

4.3

85.7

34.9

Major PPT

89.6

0.89

0.7

84.2

30.9

Minor 5ss

35.3

-1.7

3.5

49.6

46.6

Minor BPS

57.3

0.09

1.8

64.96

42.7

Associated Gene:

Gene:

BCAR3

Ensembl Gene ID:

ENSAPLG00000003983

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019439

1185705 - 1272359

86655

ENSAPLT00000004088

1185705 - 1263931

78227