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Intron Name: Anas_platyrhynchos_platyrhynchos_8_12221143_12221730_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12221143 - 12221730

Intron Length:

588

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGTTGA

5'SS Class:

strong_major

3'SS Sequence:

CTTCTCATTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTTTAATACCT

Flanking Amino Acid:

AENVQVNFTERSFDLLVKNL

Intron Amino Acid Position:

104

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.2

0.97

0.8

80.2

30.7

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

82.4

0.73

0.8

73.8

35.4

Minor 5ss

34.1

-1.8

2.8

40.8

45.4

Minor BPS

51.4

0.12

2.1

81.75

39.5

Associated Gene:

Gene:

CACYBP

Ensembl Gene ID:

ENSAPLG00000003474

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003554

12217935 - 12223016

5082

ENSAPLT00000048157

12217935 - 12222945

5011