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Intron Name: Anas_platyrhynchos_platyrhynchos_8_12221828_12222502_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12221828 - 12222502

Intron Length:

675

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAGGTTTA

5'SS Class:

strong_major

3'SS Sequence:

TTTTCCCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTAAT

U12 Branch Point Sequence:

TAGATCTTAATC

Flanking Amino Acid:

GGYTVKINNYGWDQSDKFIK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.5

0.72

76.8

34.8

Major BPS

0.92

0.9

86.2

29.1

Major PPT

90.4

0.91

0.6

85.3

Minor 5ss

42.5

-0.8

3.1

54.4

45.2

Minor BPS

66.4

0.5

1.3

67.8

37.9

Associated Gene:

Gene:

CACYBP

Ensembl Gene ID:

ENSAPLG00000003474

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048157

12217935 - 12222945

5011

ENSAPLT00000003554

12217935 - 12223016

5082