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Intron Name: Anas_platyrhynchos_platyrhynchos_8_12222696_12222995_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12222696 - 12222995

Intron Length:

300

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGCGGG

5'SS Class:

strong_major

3'SS Sequence:

GTTTGCGAACCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AACTCAC

U12 Branch Point Sequence:

CGTTTGCGAACC

Flanking Amino Acid:

MAAAREELLKDLEEVKE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

0.9

63.1

43.4

Major BPS

68.4

0.46

0.9

69.3

26.9

Major PPT

60.4

0.24

1.1

52.2

46.2

Minor 5ss

30.3

-2.3

3.3

37.8

47.1

Minor BPS

42.4

-0.6

2.3

56.19

42.1

Associated Gene:

Gene:

CACYBP

Ensembl Gene ID:

ENSAPLG00000003474

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003554

12217935 - 12223016

5082