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Intron Name: Anas_platyrhynchos_platyrhynchos_8_12292858_12307888_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12292858 - 12307888

Intron Length:

15031

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGCCAT

5'SS Class:

strong_major

3'SS Sequence:

TGTTTGATTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTGAT

U12 Branch Point Sequence:

CTGTGTTTGATT

Flanking Amino Acid:

IFHVALALLKTSKEDLLQAD

Intron Amino Acid Position:

736

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.3

0.93

0.9

77.9

38.6

Major BPS

78.6

0.71

1.2

71.4

45.1

Major PPT

80.4

0.68

0.9

74.1

40.3

Minor 5ss

39.5

-1.2

3.2

55.8

48.4

Minor BPS

53.4

0.19

1.8

69.68

42.6

Associated Gene:

Gene:

RABGAP1L

Ensembl Gene ID:

ENSAPLG00000005959

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022441

12236744 - 12452889

216146

ENSAPLT00000019583

12236744 - 12452856

216113

ENSAPLT00000006207

12246149 - 12452889

206741